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Jefferis Lab Code Status

This page summarises the main software packages produced by the Jefferis Lab in the area of neuroscience, principally computational neuroanatomy. All of this software has been written for both internal and external use. It has been developed as open source with software best practices including online documentation, sample code, version control, unit tests, continuous integration, code coverage etc. You can find more about any package by clicking on the docs badge. To ask for help, please head over to the nat-user google group.

nat

NeuroAnatomy Toolbox: An R package for the (3D) visualisation and analysis of biological image data, especially tracings of single neurons.

Build Status for nat.nblast Issues for nat Latest release for nat Docs

nat.templatebrains

Build Status for nat.templatebrains Issues for nat.templatebrains Latest release for nat.templatebrains Docs

nat.flybrains

Build Status for nat.flybrains Issues for nat.flybrains Latest release for nat.flybrains Docs

nat.nblast

Build Status for nat.nblast Issues for nat.nblast Latest release for nat.nblast Docs

flycircuit

Build Status for flycircuit Issues for flycircuit Latest release for flycircuit Docs

catmaid

Build Status for catmaid Issues for catmaid Latest release for catmaid Docs

elmr

Build Status for elmr Issues for elmr Latest release for elmr Docs