Interactively choose to join neurons in CATMAID via rgl in R. Use with caution in live tracing environments.

catmaid_interactive_join(possible.merges, downstream.neurons = NULL,
  brain = NULL, pid = 1, conn = conn, ...)

Arguments

possible.merges

a data frame of possible mergers between tree nodes for neurons in a CATMAID database, as returned via catmaid_find_likely_merge

downstream.neurons

neurons (typically smaller, new tracings) to be joined into other (typically larger) neurons, which will be pulled from CATMAID. If NULL, the downstream neurons are also pulled from CATMAID.

brain

the brain to plot while visualising potential mergers using rgl. Defaults to NULL, no brain plotted.

pid

project id. Defaults to 1

conn

CATMAID connection object, see ?catmaid::catmaid_login for details

...

methods passed to catmaid::catmaid_fetch