R/editcatmaid.R
catmaid_interactive_join.Rd
Interactively choose to join neurons in CATMAID via rgl in R. Use with caution in live tracing environments.
catmaid_interactive_join(possible.merges, downstream.neurons = NULL, brain = NULL, pid = 1, conn = conn, ...)
possible.merges | a data frame of possible mergers between tree nodes for neurons in a CATMAID database, as returned via catmaid_find_likely_merge |
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downstream.neurons | neurons (typically smaller, new tracings) to be joined into other (typically larger) neurons, which will be pulled from CATMAID. If NULL, the downstream neurons are also pulled from CATMAID. |
brain | the brain to plot while visualising potential mergers using rgl. Defaults to NULL, no brain plotted. |
pid | project id. Defaults to 1 |
conn | CATMAID connection object, see ?catmaid::catmaid_login for details |
... | methods passed to catmaid::catmaid_fetch |